Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTRQAGEATEASVRWRAVLLAAVAACAACGLVYELALLTLAASLNGGGIVATSLIVAGYIAALGAGALLIKPLLAHAAIAFIAVEAVLGIIGGLSAAALYAAFAFLDELDGSTLVLAVGTALIGGLVGAEVPLLMTLLQRGRVAGAADAGRTLANLNAADYLGALVGGLAWPFLLLPQLGMIRGAAVTGIVNLAAAGVVSIFLLRHVVSGRQLVTALCALAAALGLIATLLVHSHDIETTGRQQLYADPIIAYRHSAYQEIVV---TRRGDDLRLYLDGGLQFCTRDEYRYTESLVY--PAVSDGARSVLVLGGGDGLAARELLRQPGIEQIVQVELDPAVIELARTTLRDVNAGSLDNPRVHVVIDDAMSWLRGAAVPPAGFDAVIVDLRDPDTPVLGRLYSTEFYALAARALAPGGLMVVQAGSPYSTPTAFWRIISTIRSA-GYAVTPY------HVHVPTF--GDWGFALARLTD---IAPTPAVPSTAPA-LRFLDQQVLEAATVFSGDIRPRTLDPSTLDNPHIVEDMRHGWD |
| 2PT6 Chain:C ((69-307)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKYQNVLVFESTTYGK--VLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYED-KRVNVFIEDASKFLENVT---NTYDVIIVDSSDPIGPA-ETLFNQNFYEKIYNALKPNGYCVAQCES-------LWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKTDTGLTKPNKKLESKEFADLKYYNYENHSAA------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PT6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129925 for 1838 contacts (-70.7/contact) +
2D Compatibility (PS) -24428 + (NN) -13179 + (LL) 24132
1D Compatibility (HY) -18000 + (ID) 3950
Total energy: -165350.0 ( -89.96 by residue)
QMean score : 0.435
|
|
|