Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MTMNGQP----AELHRPIPTLARLPRPVYARAESLRAG---SW-TSRHRHAW--VQLSYAISGV-LGVHTAEGSF--FAPPQRAIWIPAQLEHEVVTSTRAEMRSLYIRGDACAWAPTRCRVLEVTPLARELIKSFCELPV-D----------------YPEGDSAESRLVQVLLDQLRLLPEVAFSL------------------------PMPRE-PRLLRL-CQALIDEPTQSLTMGDWAQ--RLGTSEKTLSRL---FQR-ETGMN------YRLWRQRQRLLASLNALEAGDSVTGAALDSG-------YDSTSAYIAAFKGLFGFTPGELFRQR------ |
| 3DSM Chain:A ((1-327)) | ASGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSD--EKAYVTQI----------WDY--------RIFIINPKTYE-ITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNP-NNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFY--VGIIPGAFCWKLEHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36967 for 1597 contacts (-23.1/contact) +
2D Compatibility (PS) -24693 + (NN) 6094 + (LL) 2420
1D Compatibility (HY) -16400 + (ID) 2800
Total energy: -72346.0 ( -45.30 by residue)
QMean score : 0.103
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