Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLRQLRYFIALAEHRSFVRAADAMGITQPAFSRSIQGLEQELGCQLVDRGSKDLRPTPEGQVVLQHALSLVQGSANLIHEIAQLNKLDAGELRFGSGPAPAQQLVPDAVADFINRHPRVQISLDVDNWEKLSRALLREEIEFFVADIRDFEADPNFQTRPLTPRRGQFFCRPQHPLLGK--DSLSTNDLFNYPLASTLIPP--GIRK---LL-ANLSGKIDFAANIRCENMHALIRIVRQTDAIGIASDETLRPYLQRGELQPLQWRNLPQNLDSLSARCGIISRSGYRLSAAAKAMIETLVELDQAQHAAA |
2H9B Chain:A ((89-297)) | -----------------------------------------------------------------------------------------EKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLRIELYEMGTKAQTEALKEGRIDAGFGRLKIS--DPAIKHSLLRNERLMVAVHASHPLNQMKDKGVHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGL-EPTKI-NEVREVQLALGLVAAGEGISLVPASTQSIQ--LFNLSYVPLLDPD-----AITPIYIAVRNME-ESTYIYSLYETIRQIYAYEGFTE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86493 for 1535 contacts (-56.3/contact) +
2D Compatibility (PS) -21983 + (NN) -17504 + (LL) 7768
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -124962.0 ( -81.41 by residue)
QMean score : 0.348
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