Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSPWLERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAVIAGPVGCFGGMSIAAGLCSYVLVTRE--ARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGE-QRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT |
1X0U Chain:A ((31-254)) | -----RIQFQHSKGKLTARERLALLFDDGKFNEIMT-FATTRATEFG-LDKQRFYGDGVVTGWGKVDGRTVFAYAQDFTVLGGSLGETHANKIVRAYELALK-----VGAPVVGINDSGGARIQEGALSLEGYGAVFKMNVMASGVIPQITIMAGP--AAGGAVYSPALTDFIIMIKGDAYYMFVTGPEITKVVLGEE-VSFQD------LGGAVVHATKSGVVHFMVDSEQEAINL-TKRLLSYLPSNNMEEPPYIDTGDPADRDATGVEQIVPNDAAKPYNMREIIYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104970 for 1899 contacts (-55.3/contact) +
2D Compatibility (PS) -24232 + (NN) -9742 + (LL) 692
1D Compatibility (HY) -8000 + (ID) 2850
Total energy: -149102.0 ( -78.52 by residue)
QMean score : 0.367
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