Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKSLHQYAHVFSRLSLFGLAFAAAAQAQSQSLTVISFGGATKAAQEQAYFKPFERSGGGQVVAGEY--NGEMAKVKAMVDVGKVSWDVVEVES-PELLRGCDEGLFERLDPARFGDPAQFVPGTFSECGVATYVWSMVMAYDSTKLA--RAPQSWADFWNVREFPG---KRGLRKGAKYTLEVALLADGVKAEDLYKVLATPEGVSRAFAKLDQLKPNIQWWEAGAQPPQWLAAGDVVMSAAYNGRIAAAQKEGVKLAIV-WP----GSLYDPEYWAVVKGTPNKALAEKFIAFASQPQTQKVFSEQIPYGPVHKGTLALLPKTVQEALPTAPANLEGARAVDAEFWVDHGEELEQRFNAWAAR |
| 3WAE Chain:A ((22-319)) | ------------------------------PTLTIYSGRG---QSLVEPLVKQFEAETGIRVQVRYSTDAQILAALQEEG--SRSPADLFWANTAGALGQASAKGLLRPLGETLLEKPI-AFVPA-SRTWVPVTVRLRVLAYNPDRIKAEELPESLLDLPRFAREKGLVGRVGWTP-TYSSFQDMVAGM-IA------LY-GEEKTREWLLAMKALAPK--AYPSNPAMLDAIRAGEVDLGSTNHYYVVRFRRAGYRLGMHHFRDGDAGNLALVTGAGLLKTSKNLAAATRFLTYLLSPQAQQYFVGNIGEYPLVKGVAL--DPNLL-PLE---EALAKSPKLDLEKLPLDRALRLLRETGVL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82530 for 2352 contacts (-35.1/contact) +
2D Compatibility (PS) -30799 + (NN) -11732 + (LL) 5036
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -132725.0 ( -56.43 by residue)
QMean score : 0.407
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