Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGADRAPPAASAG-EAVPAPQVMPAKVAPLPTSFRGTSVDGSFSVDASGNLLITRDIRNLFDYFLSAVGEEPLQQSLDRLRAYIAAELQEPARGQALALMQQYIDYKKELVLLERDLPRLADLDALRQREAAVKALRARIFSNEAHVAFFADEETYNQFTLERLAIRQDGKLSAEEKAAAIDRLRASLPEDQQESVLPQLQSELQQQTAALQAAGAG-----------PEAIRQMRQQLVGA--EATTRLEQLDRQRSAWKGRLDDYFAEKSRIEGNTGLSEADRRAAVERLAEERFSEQERLRLGALEQMRQAEQR |
| 4QCC Chain:A ((5-274)) | TKLPLIAIL----------------------RGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAY---GDKALIGAGTVLKPEQVDALARM---------------GCQLIVTPNIH-------SEVIRRAVGYGMTVCP------------GCATATEAFTALEAGA---------------------QALKIFP----SSAFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAQKQKEQRQDQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45499 for 1894 contacts (-24.0/contact) +
2D Compatibility (PS) -26916 + (NN) -5317 + (LL) 5844
1D Compatibility (HY) -6000 + (ID) 2650
Total energy: -80538.0 ( -42.52 by residue)
QMean score : 0.352
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