Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLFVCLGNICRSPTAEGVFRRKVEEAGLASRIH-VDSAGTAGWHVGKAPDQRTRLAAQRRGYDLSALRGRQVGIEDFSRHDLILAMDLSNLADLETLRAGRGAAELDLF---LRRYGSERDEVPDPYYGGEEGFEQVLDLIEHACDRLLIEAKGRL
1D2A Chain:B ((7-156))
ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKINH-KGKQIKTKHFDEYDYIIGMDESNINNLKKIQPEGSKAKVCLFGDWNTNDGTVQTIIEDPWYGDIQDFEYNFKQITYFSKQFL-------
General information:
TITO was launched using:
RESULT:
Template:
1D2A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72130 for 1208 contacts (-59.7/contact) +
2D Compatibility (PS) -15348 + (NN) -2772 + (LL) 796
1D Compatibility (HY) -10800 + (ID) 2550
Total energy: -102804.0 ( -85.10 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_1D2A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D2A-query.scw
PDB file :
Tito_Scwrl_1D2A.pdb
: