Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPHLIYYVATSLDGFIARPDGSVDWLDRFAEGGNDHGYNGFYQGIDGLLMGRGTYDIVRGFGDWPYPGKPCQVLTRNPRESAVEGVELRHDTPQEGLARLGEQGCRRVWLAGGGSLAGSCLAAGLLDEVIVSVIPQLLGAGIPLFAG-GRERRLQLLEQHGYNSGIVQMRYQVIAEDDPQ
3IX9 Chain:A ((22-169))
-TKKIVAIWAQDEEGVIG-KDNRLPWYLPA----ELQHFKETT-LNHAILMGRVTFDGMGR---RLLPKRETLILTRNPEEK-IDGV-ATFHDVQSVLDWYSA-QEKNLYIVGGKQIFQAFEP--YLDEVIVTHIHARV-EGDTYFPAEFDLSLFETVSSKFYT-----------------
General information:
TITO was launched using:
RESULT:
Template:
3IX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76379 for 1021 contacts (-74.8/contact) +
2D Compatibility (PS) -15332 + (NN) 39 + (LL) 1692
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -100880.0 ( -98.81 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_3IX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IX9-query.scw
PDB file :
Tito_Scwrl_3IX9.pdb
: