Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSAESGV-PRFLKGQGQGWLTAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDLSKLGENTLYIDCDVIQADGGTRTASITGATVALIDALAVLKKRGALKGNPLKQMVAAVSVGIYQGVPVLDLDYLEDSAAETDLNVVMTDAGGFIEVQG--TAEGAPFRPAELNAMLELAQQGMQELFELQRAALAE
3M7N Chain:F ((17-237))
--RLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPEHLQDPSKAIIRYRYNMAPFSVEERKRPGPDR-----RSIEISKVSKEAFEAVIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVALVDA-----------GVPMKGMITSVAVGKADGQLVLDPMKEEDNFGEADMPFAFLIRNGKIESIALLQMDGRMTR-DEVKQAIELAKKGALQIYEMQREAI--
General information:
TITO was launched using:
RESULT:
Template:
3M7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94089 for 1850 contacts (-50.9/contact) +
2D Compatibility (PS) -23900 + (NN) -11812 + (LL) 1032
1D Compatibility (HY) -12800 + (ID) 3850
Total energy: -145419.0 ( -78.60 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_3M7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M7N-query.scw
PDB file :
Tito_Scwrl_3M7N.pdb
: