Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKIGESFEEETVDGRKCRSLATWENENKIYCKQTLIEGDGPKTYWTRELAND-ELILTFGADDVVCTRIYVRE
4I9S Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKVSTTVWTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTKELTNDGELILTMTADDVVCTLVFVRE
General information:
TITO was launched using:
RESULT:
Template:
4I9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41234 for 962 contacts (-42.9/contact) +
2D Compatibility (PS) -15408 + (NN) -8062 + (LL) 208
1D Compatibility (HY) -16800 + (ID) 4900
Total energy: -86196.0 ( -89.60 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_4I9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I9S-query.scw
PDB file :
Tito_Scwrl_4I9S.pdb
: