Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRKCRSLPTWENENKIHCTQTLLEGDGPKTYWTRELAND-ELILTFGADDVVCTRIYVRE
3FEP Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVWTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTLELTNDGELIETMTADDVVCTKVYVRE
General information:
TITO was launched using:
RESULT:
Template:
3FEP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32577 for 971 contacts (-33.5/contact) +
2D Compatibility (PS) -14892 + (NN) -4315 + (LL) 208
1D Compatibility (HY) -15600 + (ID) 5050
Total energy: -72226.0 ( -74.38 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_3FEP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FEP-query.scw
PDB file :
Tito_Scwrl_3FEP.pdb
: