Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHSKRTHCPDWDSRESWGHESYSGSHKRKRRSHSSTQENRHCKPHHQFKDSDCHYLEARCLNERDYRDRRYIDEYRNDYCEGYVPRHYHRDVESTYRIHCSKSSVRSRRSSPKRKRNRPCASHQSHSKSHRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPAHMIQKTRKRKYFHHNQLDWDEHSSAGRYVRRRCKPLK-EFMLCHDEEHEKLFDLVRRMLEYDPARRITLDEALQHPFFDLLKRK
4BGQ Chain:A ((10-302))---------------------------------------------------------------------------------------------------------------------------------------------------------VM-NKFEILGVVGEGAYGVVLKCRHK-ETHEIVAIKKFK----VKETTLRELKMLRTLKQ--E----NIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMP-NGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH-------------------NDVLKLCDFGFARNLSE-------TRWYRSPELLLGAPYGKSVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMKLFYSNPRFHG--LRFPAVNHP--------QSLERRYLGI---LNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQTQR--


General information:
TITO was launched using:
RESULT:

Template: 4BGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -207117 for 2113 contacts (-98.0/contact) +
2D Compatibility (PS) -29325 + (NN) -7330 + (LL) 9260
1D Compatibility (HY) -25600 + (ID) 4150
Total energy: -264262.0 ( -125.06 by residue)
QMean score : 0.274

(partial model without unconserved sides chains):
PDB file : Tito_4BGQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BGQ-query.scw
PDB file : Tito_Scwrl_4BGQ.pdb: