Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
1AN0 Chain:B ((2-189))
-QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV-IGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE--EPKKSRRCV--
General information:
TITO was launched using:
RESULT:
Template:
1AN0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64341 for 1480 contacts (-43.5/contact) +
2D Compatibility (PS) -19394 + (NN) -9882 + (LL) 488
1D Compatibility (HY) -1600 + (ID) 2650
Total energy: -97379.0 ( -65.80 by residue)
QMean score : 0.356
(partial model without unconserved sides chains):
PDB file :
Tito_1AN0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AN0-query.scw
PDB file :
Tito_Scwrl_1AN0.pdb
: