Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
2BOV Chain:A ((12-177))
LALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQW-NVNYVETSAKTRANVDKVFFDLMREIRA-----------------
General information:
TITO was launched using:
RESULT:
Template:
2BOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84815 for 1325 contacts (-64.0/contact) +
2D Compatibility (PS) -17889 + (NN) -5347 + (LL) 1128
1D Compatibility (HY) -16400 + (ID) 4300
Total energy: -127623.0 ( -96.32 by residue)
QMean score : 0.670
(partial model without unconserved sides chains):
PDB file :
Tito_2BOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BOV-query.scw
PDB file :
Tito_Scwrl_2BOV.pdb
: