Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVVGVDVIHSIEDIYQLPGHVFIFGGQILFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
3F0V Chain:X ((1-157))
-TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLYEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRK-
General information:
TITO was launched using:
RESULT:
Template:
3F0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125203 for 1167 contacts (-107.3/contact) +
2D Compatibility (PS) -16597 + (NN) -2862 + (LL) 272
1D Compatibility (HY) -23200 + (ID) 7700
Total energy: -175290.0 ( -150.21 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_3F0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0V-query.scw
PDB file :
Tito_Scwrl_3F0V.pdb
: