Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRDPRKPLAILRHVGLLCATGPQRWRFQHSCAEEHSNCARHPLWTGPVSSAEGTRQSPINIQWKDSVYDPQLAPLRVS-YDAA--SCRYLWNTGYFFQVEFDDSCEDSGISGGPLGNHYRLKQFHFHWGATDE-WGSEHAVDGHTYPAELHLVHWNSTKYENYKKASVGENGLAVIGVFLKLGAHHQALQKLVDVLPEVRHKDTQVAMGPFDPSCLLPAC-RDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSTFRTLLFSGR--GEEEDVMVNNYRPLQPLRDRKLRSSFRLDRTKMRS |
| 4HT2 Chain:A ((3-263)) | -------------------------KWTYFGPDGENS--------WSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSD---MHIQG--LQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFSQ------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HT2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119229 for 2046 contacts (-58.3/contact) +
2D Compatibility (PS) -26925 + (NN) -8572 + (LL) 2132
1D Compatibility (HY) -18800 + (ID) 4250
Total energy: -175644.0 ( -85.85 by residue)
QMean score : 0.628
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