Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKATYKERAATHP-SPVAAKLFNIMHEKQTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQYSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLATGEYTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDDVV-STGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN
3G3D Chain:A ((56-311))--ELSFGARAELPRIHPVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLD-VMKELITLAKCHEFLIFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPL---HRGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVS---MKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIIS-AADRLEAAEMYRKAAWEAYLSRLG---


General information:
TITO was launched using:
RESULT:

Template: 3G3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165447 for 2232 contacts (-74.1/contact) +
2D Compatibility (PS) -26910 + (NN) -5221 + (LL) 304
1D Compatibility (HY) -27200 + (ID) 6500
Total energy: -230974.0 ( -103.48 by residue)
QMean score : 0.667

(partial model without unconserved sides chains):
PDB file : Tito_3G3D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3G3D-query.scw
PDB file : Tito_Scwrl_3G3D.pdb: