Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKATYKERAATHP-SPVAAKLFNIMHEKQTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQYSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLATGEYTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDDVV-STGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN |
3G3D Chain:A ((56-311)) | --ELSFGARAELPRIHPVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLD-VMKELITLAKCHEFLIFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPL---HRGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVS---MKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIIS-AADRLEAAEMYRKAAWEAYLSRLG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165447 for 2232 contacts (-74.1/contact) +
2D Compatibility (PS) -26910 + (NN) -5221 + (LL) 304
1D Compatibility (HY) -27200 + (ID) 6500
Total energy: -230974.0 ( -103.48 by residue)
QMean score : 0.667
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