Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTS-EVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
2D6M Chain:A ((15-148))
-PIIPFTGPIQGGLQEGLQVTLQGTTKSFAQRFVVNFQNSFN-GNDIAFHFNPRFEEGGYVVCNTKQNGQWGPEERKMQMPFQKGMPFELCFLVQRSEFKVMVNKKFFVQYQHRVPYHLVDTIAVSGCLKLSFITF-
General information:
TITO was launched using:
RESULT:
Template:
2D6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81995 for 980 contacts (-83.7/contact) +
2D Compatibility (PS) -14233 + (NN) -6727 + (LL) 460
1D Compatibility (HY) -12000 + (ID) 2200
Total energy: -116695.0 ( -119.08 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_2D6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D6M-query.scw
PDB file :
Tito_Scwrl_2D6M.pdb
: