Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
4HY0 Chain:F ((22-117))
--------------TNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLE-------
General information:
TITO was launched using:
RESULT:
Template:
4HY0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25862 for 679 contacts (-38.1/contact) +
2D Compatibility (PS) -10491 + (NN) -6947 + (LL) 944
1D Compatibility (HY) -12800 + (ID) 4800
Total energy: -59956.0 ( -88.30 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_4HY0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HY0-query.scw
PDB file :
Tito_Scwrl_4HY0.pdb
: