Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGIIGAMEEEVTILKNKLTQLSEISVAHVKFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHDADATAFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSSQTVEALVSQL
4JOS Chain:A ((25-250))
KIAILGAMEIEIQPILQKLEKYETVEYANNKYYVANYNGIELVVAYSKIGKVFSSLTATIMIEHFGVDALLFTGVAGGLQ-DLQVGDMIAATATVQHDVDITAFGYPYGKIPISEVEIATSARILEQAKVIAKELNLNLHTGVIATGDQFVHSAERKDFVVKEF-DAKAIEMEGASVNLICNEMNIPSFILRSISDTADGDAPDNFDEFAKMAANRSADFVMKLVDRI
General information:
TITO was launched using:
RESULT:
Template:
4JOS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140499 for 2045 contacts (-68.7/contact) +
2D Compatibility (PS) -24532 + (NN) -10801 + (LL) -36
1D Compatibility (HY) -16400 + (ID) 3950
Total energy: -196218.0 ( -95.95 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_4JOS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JOS-query.scw
PDB file :
Tito_Scwrl_4JOS.pdb
: