Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTFA
4GRU Chain:A ((1-114))
-PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTFA
General information:
TITO was launched using:
RESULT:
Template:
4GRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89538 for 800 contacts (-111.9/contact) +
2D Compatibility (PS) -13057 + (NN) -11086 + (LL) 208
1D Compatibility (HY) -16400 + (ID) 5700
Total energy: -135573.0 ( -169.47 by residue)
QMean score : 0.693
(partial model without unconserved sides chains):
PDB file :
Tito_4GRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GRU-query.scw
PDB file :
Tito_Scwrl_4GRU.pdb
: