Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
1IPB Chain:A ((27-217))
--------------------------EVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
General information:
TITO was launched using:
RESULT:
Template:
1IPB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78269 for 1338 contacts (-58.5/contact) +
2D Compatibility (PS) -20119 + (NN) -9645 + (LL) 828
1D Compatibility (HY) -26800 + (ID) 9550
Total energy: -143555.0 ( -107.29 by residue)
QMean score : 0.781
(partial model without unconserved sides chains):
PDB file :
Tito_1IPB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IPB-query.scw
PDB file :
Tito_Scwrl_1IPB.pdb
: