Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRSCPSFSASSEGTRIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
2ZI9 Chain:B ((38-279))
------------------TRIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQ--------------NGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYASLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2ZI9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113159 for 1737 contacts (-65.1/contact) +
2D Compatibility (PS) -23637 + (NN) -6658 + (LL) 1376
1D Compatibility (HY) -33200 + (ID) 11150
Total energy: -186428.0 ( -107.33 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI9-query.scw
PDB file :
Tito_Scwrl_2ZI9.pdb
: