Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEECWVTEIANGSKDGLDSNPMKDYMILSGPQKTAVAVLCTLLGLLSALENVAVLYLILSSHQLRRKPSYLFIGSLAGADFLASVVFACSFVNFHVFHGVDS---KAVFLLKIGSVTMTFTASVGSLLLTAIDRYLCLRYPPSYKALLTRGRALVTLGIMWVLSALVSYLPLMGWTCCP---RPCSELFPLIPNDYLLSWLLFIAF-LFSGIIYTYGHVLWKAHQHVASLSGHQD------------------------------R-----------------------------------------------------------------------------------------------------Q-V--------------PGMARMRLDVRLAKTLGLVLAVLLICWFPVLALMAHSLATTLSDQVKKAFAFCSMLCLINSMVNPVIYALRSGEIRSSAHHCLAHWKKCVRGLGSEAKEEAPRSSVTETEADGKITPWPDSRDLDLSDC |
| 3RZE Chain:A ((9-443)) | ---------------------------------MPLVVVLSTICLVTVGLNLLVLYAVRSERKLH-TVGNLYIVSLSVADLIVGAV-VMPMNILYLLM-SKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPIL-GWNH--RREDKCETDFYDV-TWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKN-CCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHI-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233424 for 1982 contacts (-117.8/contact) +
2D Compatibility (PS) -27687 + (NN) -12879 + (LL) 3196
1D Compatibility (HY) -21200 + (ID) 3100
Total energy: -295094.0 ( -148.89 by residue)
QMean score : 0.315
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