Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWQKNQTSLADFILEGLFDDSLTHLFLFSLTMVVFLIAVSGNTLTILLICIDPQLHTPMYFLLSQLSLMDLMHVSTIILKMATNYLSGKKSISFVGCATQHFLYLCLGGAECFLLAVMSYDRYVAICHPLRYAVLMNKKVGLMMAVMSWLGASVNSLIHMAILMHFPFCGPRKVYHFYCEFPAVVKLVCGDITVYETTVYISSILLLLPIFLISTSYVFILQSVIQMRSSGSKRNAFATCGS-HLTVVSLWFGACIFSYMRPRSQ-------CT--LL--QNKVGSVFYSIITPTLNSLIYTLRNKDVAKALRRVLRRDVITQCIQRLQLWLPRV |
| 2LNL Chain:A ((39-323)) | -----------------------KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASK-VNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLT-QKRHLVKFVCLGCWGLSMNLSLPFFLFRQA---YHP-NNSSPVCYEVLGN---DTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQ-KHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214617 for 1968 contacts (-109.1/contact) +
2D Compatibility (PS) -27166 + (NN) -6051 + (LL) 4500
1D Compatibility (HY) -20000 + (ID) 2350
Total energy: -265684.0 ( -135.00 by residue)
QMean score : 0.220
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