Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGMNHSVVSEFVFMGLTNSREIQLLLFVFSLLFYFASMMGNLVIVFTVTMDAHLHSPMYFLLANLSIIDMAFCSITAPKMICDIF-KKHKAISFRGCITQIFFSHALGGTEMVLLIAMAFDRYMAICKPLHYLTI---MSPRMCLYFLATSSIIGLIHSLVQLVFVVDLPFCGPNIFDSFYCDLPRLLRLACTNTQELEFMVTVNSGLISVGSFVLLVISYIFILFTVWKHSSGGLAKALSTLSAHVTVVILFFGPLMFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTFRNKDMKVAMRRLCSRLAHFTKIL
3PBL Chain:A ((41-224))--------------------------YALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT-------GDPTVCSI----------SNP-D-FVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNA


General information:
TITO was launched using:
RESULT:

Template: 3PBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147047 for 1237 contacts (-118.9/contact) +
2D Compatibility (PS) -17870 + (NN) -410 + (LL) 2980
1D Compatibility (HY) -15200 + (ID) 1600
Total energy: -179147.0 ( -144.82 by residue)
QMean score : 0.262

(partial model without unconserved sides chains):
PDB file : Tito_3PBL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PBL-query.scw
PDB file : Tito_Scwrl_3PBL.pdb: