Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MQAALTAFFVLLFSLLSLLGIAANGFIVLVLGREWLRYGRLLPLDMILISLGASRFCLQLVG---TVHNFYYSAQKVEYSGGLGRQFFHLHWHFLNSATFWFCSWLSVLFCVKIANITHSTFLWLKWRFP---GWVPWLLLGSVL-------ISFIITLLFFWVNYPVYQEFLIRKFSGNMTYKWNTRIETYYFPSLKLVIWSIPFSVFLVSIMLLINSLRRHTQRMQHNGHSLQDPSTQAHTRALKSLISFLILYALSFLSLI------IDAAKFISMQNDFYWPWQIAVYLC---------ISVHPFILI-FSNLKLRSVFSQLLLLARGFWVA |
| 4X2Z Chain:A ((9-309)) | QKTIYLTEDGVKYRSIVLKPGDSLGQFGQVYAKNKIVFTADDVEDKEILYVPTTDKSILEYYGLDAQKYVIYLQTLAQKWNVQYRDNFLILEWRDGN---CWISSAIVLLQAAKIRFKGFLTEAWAKLLGGDPTDFVAWCYASCTAKVGDFSDANWLLANLAEHFDADYTNAFLKKRVSCNC------GIKSYELRGLEACIQPVRAT---------------NLLHFKTQYSNCPTCGANNTDEVIEASLPYLLLFATDGPATVDCDEDAVGTVVFVGSTNSGHCYTQAAGQAFDNLAKDRKFGKKSPYITAMYTRFAFKNETS------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4X2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -298369 for 1972 contacts (-151.3/contact) +
2D Compatibility (PS) -27667 + (NN) 638 + (LL) 3752
1D Compatibility (HY) -2800 + (ID) 2150
Total energy: -326596.0 ( -165.62 by residue)
QMean score : 0.098
|
|
|