Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ISCSTVYSTLMPCLQYVQQ---GG---S------------PARGCCTGIQNLLVEANNSPDRRTICGCLENVANGASGG---PY-----ITRAAALPSKCNVALP--YKISPSVDCNSIH
1W2Q Chain:A ((22-121))
------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME------NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDV--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46456 for 426 contacts (-109.1/contact) +
2D Compatibility (PS) -7590 + (NN) -2707 + (LL) 984
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -59319.0 ( -139.25 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: