Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------AGECGRASADRVALRLA--------PCVS-------------AADDPQSTPTSSCCSAVHAIGQSPSCLCAVMLSGTARAAGIKPEVA---ITIPKRCNMADRPVGYKCGDYTL-P---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1D0V Chain:A ((4-349)) | LHALLRDIPAPDAEAMARTQQHIDGLLKPPGSLGR--LETLAVQLAGMPGLNGTPQVGEKAVLVMCADHGVWDEGVAVSPKIVTAIQAANMTRGTTGVCV-----LAAQAGAKVHVIDVGIDAEPIPGVVNMRVARGCGNIAVGPAMSRLQAEALLLEVSRYACDLAQRGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVRRAIAINQPNPRDGIDVLSKVGGFDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAVRPYLIPSHFSAEKGARIALAHLSMEPYLHMAMRLGEGSGAALAMPIVEAACAMFHNMGELAASNIVLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17687 for 396 contacts (-44.7/contact) +
2D Compatibility (PS) -9254 + (NN) -6803 + (LL) 492
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -36652.0 ( -92.56 by residue)
QMean score : 0.373
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