Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------AGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACC----AAVRDIGTHQSHACLCAVLL----------SSTVRRSGVKPEVA---ITIPKRCKLANRPVGYKCGAYTL-PSLQG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
1D0V Chain:A ((4-349)) | LHALLRDIPAPDAEAMARTQQHIDGLLKPPGSLGR--LETLAVQLAGMPGLNGTPQVGEKAVLVMCADHGVWDEGVAVSPKIVTAIQAANMTRGTTGVCVLAAQAGAKVHVIDVGIDAEPIPGVVNMRVARGCGNIAVGPAMSRLQAEALLLEVSRYACDLAQRGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVRRAIAINQPNPRDGIDVLSKVGGFDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAVRPYLIPSHFSAEKGARIALAHLSMEPYLHMAMRLGEGSGAALAMPIVEAACAMFHNMGELAASNIVLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16317 for 456 contacts (-35.8/contact) +
2D Compatibility (PS) -10107 + (NN) -4364 + (LL) -88
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -35976.0 ( -78.89 by residue)
QMean score : 0.356
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