Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------------ERCNDSGIEVLRGCPDSIDKELPTP---PRPSQGCCTLVRIIGMECVCEVINKEIEAAIDMQKLVNVAAACGRPLAPGSQCGSYLVPGGMIRH
1FNF Chain:? ((1142-1235))
PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTF----------DNLSPGLEYNV---SVYTVKD--DKESVPISD---TIIPA-----
General information:
TITO was launched using:
RESULT:
Template:
1FNF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12385 for 387 contacts (-32.0/contact) +
2D Compatibility (PS) -7439 + (NN) -3440 + (LL) 1836
1D Compatibility (HY) -400 + (ID) 400
Total energy: -22228.0 ( -57.44 by residue)
QMean score : 0.076
(partial model without unconserved sides chains):
PDB file :
Tito_1FNF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FNF-query.scw
PDB file :
Tito_Scwrl_1FNF.pdb
: