Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | QDNNPLEHCRDVFVSFMPCMGFVEGIFQQPSPDCCRGVTHLNNVVKFTSPGSRNRQDSGETERVCLCIEIMGNANHLPFLPAAINNLPLRCSLTLSFPISVDMDCSQFRNTKNPDVEKLN |
M039 Chain:A ((6-109)) | QDNNPLEHCRDVFVSFMPCMGFVEGIFQQPSPDCCRGVTHLNNVVKFTS---------GETERVCLCIEIMGNANHLPFLPAAINNLPLRCSLTLSFPISVDMDCSQFR----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: M039.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3374 for 723 contacts (4.7/contact) +
2D Compatibility (PS) -9234 + (NN) 3541 + (LL) -84
1D Compatibility (HY) 8000 + (ID) 50
Total energy: 5547.0 ( 7.67 by residue)
QMean score : -0.154
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