Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNICPRVNRIVPPCVAYGLGRAPIAPCCRALNDLRFVNTRNLRRAACRCLVGVVSRNPGLTQNPRFQNIPRDCRNTFVRPFWWRPRIQCGRINLTDKLIYLDAEE
M039 Chain:A ((2-97))
QNICPRVNRIVPPCVAYGLGRAPIAPCCRALNDLRFVNTRNLRRAACRCLVGVVSRNPGLTQNPRFQNIPRDCRNTFVRPFWWRPRIQCGRIN------------
General information:
TITO was launched using:
RESULT:
Template:
M039.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25423 for 688 contacts (-37.0/contact) +
2D Compatibility (PS) -9410 + (NN) -7082 + (LL) 956
1D Compatibility (HY) 5200 + (ID) 300
Total energy: -36059.0 ( -52.41 by residue)
QMean score : -0.018
(partial model without unconserved sides chains):
PDB file :
Tito_M039.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M039-query.scw
PDB file :
Tito_Scwrl_M039.pdb
: