Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNICPRVNRIVNPCVAYGLGRAPIAPCCRALNDLRFVDSRNLRRAACRCLVGVVNRNPGLRRNNRFQNVPGDCRNNFVRPFWWRPRIQCNRVNLMDKLEYLDAEE
M039 Chain:A ((3-98))
QNICPRVNRIVNPCVAYGLGRAPIAPCCRALNDLRFVDSRNLRRAACRCLVGVVNRNPGLRRNNRFQNVPGDCRNNFVRPFWWRPRIQCNRVN------------
General information:
TITO was launched using:
RESULT:
Template:
M039.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1332 for 642 contacts (-2.1/contact) +
2D Compatibility (PS) -9403 + (NN) -3761 + (LL) 1100
1D Compatibility (HY) 7200 + (ID) 250
Total energy: -6446.0 ( -10.04 by residue)
QMean score : 0.000
(partial model without unconserved sides chains):
PDB file :
Tito_M039.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M039-query.scw
PDB file :
Tito_Scwrl_M039.pdb
: