Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCGTVSGNLAACIGYLTQ---NG--P-------------LPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFP----TLN-----AARAAGLPKACGVNIPYKISKSTNCNSVR
1W2Q Chain:A ((22-114))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34317 for 399 contacts (-86.0/contact) +
2D Compatibility (PS) -7057 + (NN) -3544 + (LL) 1284
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -45834.0 ( -114.87 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: