Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVSSSLAPCVNFLKS---GG---A------------PSPQCCNGLGGMVNQAKSTADKQAACNCLKTAAKNMP----GLN-----PANAESLPSKCKVNIPYKISFSTNCNSIK
1W2Q Chain:A ((22-114))
------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26098 for 398 contacts (-65.6/contact) +
2D Compatibility (PS) -6622 + (NN) -1175 + (LL) 1440
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -35255.0 ( -88.58 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: