Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APGCDTVDTDLAPCISYLQTGTGNPTVQCCSGVKTLAGTAQTTEDRKAICECIKTAAIRVKPVANAVKSLPGLCSVTLPFPISIATDCNKIV
M039 Chain:A ((1-94))
APGCDTVDTDLAPCISYLQTGTGNPTVQCCSGVKTLAGTAQTTEDRKAICECIKTAAIRVKPVANAVKSLPGLCSVTLPFPISIATDCNKIV
General information:
TITO was launched using:
RESULT:
Template:
M039.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64869 for 711 contacts (-91.2/contact) +
2D Compatibility (PS) -9433 + (NN) -2856 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 4600
Total energy: -94158.0 ( -132.43 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_M039.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M039-query.scw
PDB file :
Tito_Scwrl_M039.pdb
: