Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCGQVTSSLAPCIGYLTGNGAGGVPPGCCGGIKSLNSAAQTTPDRQAACKCIKSAAAGISGINYGIASGPPGKCGVNIPYKISPSTDCNSVK
M039 Chain:A ((1-94))
AVTCGQVTSSLAPCIGYLTGNGAGGVPPGCCGGIKSLNSAAQTTPDRQAACKCIKSAAAGISGINYGIASGPPGKCGVNIPYKISPSTDCNSVK
General information:
TITO was launched using:
RESULT:
Template:
M039.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44255 for 664 contacts (-66.6/contact) +
2D Compatibility (PS) -9782 + (NN) -2099 + (LL) 0
1D Compatibility (HY) -10800 + (ID) 4700
Total energy: -71636.0 ( -107.89 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_M039.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M039-query.scw
PDB file :
Tito_Scwrl_M039.pdb
: