Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCNDVTGNLTPCLPYLRS---GGK----PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQL----KV----------RPDMASSLPGKCGISTSIPINPNVNCNTIP
1HSS Chain:A ((15-105))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIVV------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27145 for 389 contacts (-69.8/contact) +
2D Compatibility (PS) -6286 + (NN) -163 + (LL) 988
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -36806.0 ( -94.62 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: