Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCSAVYSTLMPCLQYVQQ---GG---TP------------ARGCCAGIQNLLAEANNSPDRRTICGCLKNVANAAPGG---SE-----ITRAAALPSKCNVNLP--YKISPSVDCNSIH
1W2Q Chain:A ((22-121))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME------NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDV--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46713 for 421 contacts (-111.0/contact) +
2D Compatibility (PS) -7697 + (NN) -4719 + (LL) 1172
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -61907.0 ( -147.05 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: