Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCSTVISDLVPCLSYVAGS---AANP---TAACCNGVKALNAAAKTTPDRQAACKCIKSAAASY----KY----------NSGKAGKIPGLCGVSVSFPISASVNCNAIH
1HSS Chain:A ((15-107))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIVVDA----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40932 for 412 contacts (-99.3/contact) +
2D Compatibility (PS) -6417 + (NN) -2724 + (LL) 1900
1D Compatibility (HY) -5200 + (ID) 550
Total energy: -53923.0 ( -130.88 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: