Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ISCTEAVAAMNPCLPFLIGAQ----A-S-------PVAPCCLAVQNVNQEASTKEIRRELCDCFKKAGPAL--G----VKPDKAKQLPDLCHVQVPVPIDPTIDCSKVTEDIAW
1S6D Chain:A ((19-97))
-------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEK--------CMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM--------------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34752 for 391 contacts (-88.9/contact) +
2D Compatibility (PS) -5732 + (NN) 1252 + (LL) 2604
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -41228.0 ( -105.44 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: