Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------VDCGQVNSSLASCIPFLTG---GVASPS---ASCCAGVQNLKTLAPTSADRRAACECIKAAAARF-------PTIK----QDAASSLPKKCGVDINIPISKTTNCQAIN---------
1HSS Chain:A ((5-124))
MCYPGQAFQ----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVV--DASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50302 for 507 contacts (-99.2/contact) +
2D Compatibility (PS) -8261 + (NN) -3823 + (LL) 724
1D Compatibility (HY) -6000 + (ID) 700
Total energy: -68362.0 ( -134.84 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: