Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALTCGQVTSSLFSCLPYLRNTGPLGDCCSGVKKLKGQAQTTADRQTACNCLKSTAGSIKGLNFGKAASLPSTCSVNIPYEISPSTDCSKVQ
M039 Chain:A ((1-150))
ALTCGQVTSSLFSCLPYLRNTGPLGDCCSGVKKLKGQAQTTADRQTACNCLKSTAGSIKGLNFGKAASLPSTCSVNIPYEISPSTDCSKVQ
General information:
TITO was launched using:
RESULT:
Template:
M039.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52979 for 683 contacts (-77.6/contact) +
2D Compatibility (PS) -9211 + (NN) -2546 + (LL) 0
1D Compatibility (HY) -11200 + (ID) 4550
Total energy: -80486.0 ( -117.84 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_M039.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M039-query.scw
PDB file :
Tito_Scwrl_M039.pdb
: