Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGQVSSAIAPCLSYARGM--GS-A---PSAGCCSGVRNLKSAASTAADRRAACNCLKNAARGVS---GL----------NAGNAASIPSKCGVSIPYTISTSTDCSR
1HSS Chain:A ((15-106))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIVVD---------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42336 for 423 contacts (-100.1/contact) +
2D Compatibility (PS) -6398 + (NN) -1359 + (LL) 1512
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -54131.0 ( -127.97 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: