Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVSSSLAPCIPYVRG---GGA----VPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-------G----VNPNNAAALPGKCGVSIPYKISASTNCATVK
1HSS Chain:A ((15-105))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVV------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46353 for 404 contacts (-114.7/contact) +
2D Compatibility (PS) -6304 + (NN) 1328 + (LL) 1488
1D Compatibility (HY) -6800 + (ID) 800
Total energy: -57441.0 ( -142.18 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: