Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QECLDNLSNMQVCAPLVLPGAVNPAPNSNCCIALQATN----KDCICNALR------AATTFT---ATC--NLPS-LDC---
1HYP Chain:? ((6-80))
PSC----PDLSICLN-ILGGSLGTV--DDCCALIGGLGDIEAIVCLCIQLRALGILNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38228 for 320 contacts (-119.5/contact) +
2D Compatibility (PS) -5881 + (NN) -3402 + (LL) 152
1D Compatibility (HY) -6400 + (ID) 700
Total energy: -54459.0 ( -170.18 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: