Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDEECLAGIGNLISCDPYVIPGANQGSPSKECCSALGGVK----QSCYCTAIDI--ISNLP-------ARC--SLPA-VNCA--
1HYP Chain:? ((6-80))
--PSC----PDLSICLN-ILGGSLGTV--DDCCALIGGLGDIEAIVCLCIQLRALGILNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28990 for 311 contacts (-93.2/contact) +
2D Compatibility (PS) -5938 + (NN) -1366 + (LL) 320
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -42824.0 ( -137.70 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: