Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---AGECGATPPDTVALRLAPCASAAEDPGSAPSGSCCSAVHAIGKQSPRCLCAVMLS------------NTARSAGIKAEVAITIPKRCNLADRPV--------GY---KCGGNQAN-----
1PP7 Chain:U ((5-118))
DLEASFTSRLPPEIVAALKR---KSSRDPNSRFPRKLHMLLTYL-ASNPQLEEEIGLSWISDTEFKMKKKNVALVMGIKLN---TL--NVNLRDLAFEQLQHDKGGWTQWKRSGFTRNSVFED
General information:
TITO was launched using:
RESULT:
Template:
1PP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7500 for 484 contacts (-15.5/contact) +
2D Compatibility (PS) -8632 + (NN) -2019 + (LL) 352
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: -20999.0 ( -43.39 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_1PP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PP7-query.scw
PDB file :
Tito_Scwrl_1PP7.pdb
: