Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TWEVKMAGAELSDAQCKEERNLGINACKPVVYGKLPSPECCQRVRVTHLECVCPVISPQLAALIDINRAVRLIEGCGRRVPRHYKCGSITTP
M039 Chain:A ((13-117))
------------DAQCKEERNLGINACKPVVYGKLPSPECCQRVRVTHLECVCPVISPQLAALIDINRAVRLIEGCGRRVPRHYKCGSITTP
General information:
TITO was launched using:
RESULT:
Template:
M039.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41215 for 540 contacts (-76.3/contact) +
2D Compatibility (PS) -7884 + (NN) 1330 + (LL) 1144
1D Compatibility (HY) -12000 + (ID) 4000
Total energy: -62625.0 ( -115.97 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_M039.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M039-query.scw
PDB file :
Tito_Scwrl_M039.pdb
: